Miyakogusa Predicted Gene

Lj2g3v0546890.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L3P6_SOYBN 995 88.6 91.9 (tr|I1L3P6) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G26360.1 961 86.5 91.0 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr5:9255561-9258891 REVERSE LENGTH=555
Medicago Medtr2g013540.1 1020 90.5 92.6 | TCP-1/cpn60 chaperonin family protein | HC | chr2:3653927-3660361 | 20130731
Soybean Glyma09g28650.2 995 88.6 91.9  
LJGI gnl|LJGI|TC64883 1808 100.0 100.0 homologue to UniRef100_O81503 Cluster: F9D12.18 protein; n=1; Arabidopsis thaliana|Rep: F9D12.18 protein - Arabidopsis thaliana (Mouse-ear cress), partial (59%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0546890.1 length: 541 aa.
IPR002194 Chaperonin TCP-1, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
PatternScan PS00750 TCP1_1 NA 36-48
PatternScan PS00751 TCP1_2 NA 57-73
PatternScan PS00995 TCP1_3 NA 85-93
IPR002423 Chaperonin Cpn60/TCP-1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0044267 cellular protein metabolic process    
HMMPanther PTHR11353 CHAPERONIN 0 1-518
HMMPfam PF00118 Cpn60_TCP1 6.6e-143 31-510
superfamily SSF48592 GroEL 3.9e-85 10-513
IPR012719 T-complex protein 1, gamma subunit
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
HMMPanther PTHR11353:SF24 CHAPERONIN 0 1-518
HMMTigr TIGR02344 chap_CCT_gamma: 1.6e-261 4-515
IPR017998 Chaperone tailless complex polypeptide 1 (TCP-1)
FPrintScan PR00304 TCOMPLEXTCP1 3.1e-28 33-49
55-73
85-104
359-381
393-405
IPR027409 GroEL-like apical domain
Gene3D G3DSA:3.50.7.10 no description 1.1e-39 212-359
superfamily SSF52029 GroEL 3.4e-41 210-364
IPR027410 TCP-1-like chaperonin intermediate domain
Gene3D G3DSA:3.30.260.10 no description 9.8e-27 360-389
IPR027413 GroEL-like equatorial domain
Gene3D G3DSA:1.10.560.10 no description 1.3e-89 390-512
no_ID  
Coil coil coiled-coil NA 370-391
Seg seg seg NA 253-266
superfamily SSF54849 GroEL-intermediate 3.6e-27 145-392
Wolf-PSORT
Lj2g3v0546890.1	cyto 10, nucl 2.5, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0546890.1