Miyakogusa Predicted Gene

Lj2g3v0523230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I444_MEDTR 205 63.8 77.9 (tr|G7I444) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_1g091670 PE=4 SV=1
TAIR_pep AT1G62930.1 110 37.1 61.5 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:23306534-23308423 FORWARD LENGTH=629
Medicago Medtr4g107180.1 206 64.6 81.0 | pentatricopeptide (PPR) repeat protein | LC | chr4:44263594-44262119 | 20130731
Soybean Glyma09g07290.1 194 64.6 77.6  
LJGI gnl|LJGI|TC82599 210 83.5 83.5 weakly similar to UniRef100_A7PJG0 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0523230.1 length: 150 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 9e-15 9-57
80-125
HMMTigr TIGR00756 PPR: 0.0004 11-44
46-77
81-115
116-146
ProfileScan PS51375 PPR 9.778 9-43
44-78
79-113
114-148
no_ID  
HMMPanther PTHR24015 FAMILY 1.7e-46 1-146
HMMPanther PTHR24015:SF0 SUBFAMILY 1.7e-46 1-146
Seg seg seg NA 28-37
Wolf-PSORT
Lj2g3v0523230.1	extr 9, cyto 2.5, cyto_E.R. 2, cysk 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0523230.1