Miyakogusa Predicted Gene

Lj2g3v0461500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MQ40_SOYBN 855 89.4 93.8 (tr|I1MQ40) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G11820.2 736 77.0 86.4 | Symbols: MVA1, FKP1 | hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase | chr4:7109124-7111901 REVERSE LENGTH=461
Medicago Medtr6g089570.1 855 87.7 94.1 | 3-hydroxy-3-methylglutaryl coenzyme A synthase | HC | chr6:22746750-22740317 | 20130731
Soybean Glyma16g32480.1 855 89.4 93.8  
LJGI gnl|LJGI|TC69215 1392 99.1 99.1 similar to UniRef100_A7QKD9 Cluster: Chromosome chr2 scaffold_112, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_112, whole genome shotgun sequence - Vitis vinifera (Grape), partial (47%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0461500.1 length: 459 aa.
IPR000590 Hydroxymethylglutaryl-coenzyme A synthase, active site
method AccNumber shortName E-value location
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
PatternScan PS01226 HMG_COA_SYNTHASE NA 110-125
IPR010122 Hydroxymethylglutaryl-CoA synthase, eukaryotic
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMTigr TIGR01833 HMG-CoA-S_euk: 2.8e-216 7-454
IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF01154 HMG_CoA_synt_N 2.4e-85 7-179
IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF08540 HMG_CoA_synt_C 5e-113 180-454
IPR016038 Thiolase-like, subgroup
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.47.10 no description 0.00082 9-272
327-374
IPR016039 Thiolase-like
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF53901 Thiolase-like 1.3e-33 180-454
9-179
no_ID  
HMMPanther PTHR11877 HYDROXYMETHYLGLUTARYL-COA 3.7e-251 1-459
HMMPanther PTHR11877:SF10 SUBFAMILY 3.7e-251 1-459
Wolf-PSORT
Lj2g3v0461500.1	chlo 4, extr 4, nucl 2, cyto 2, cyto_nucl 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0461500.1