Miyakogusa Predicted Gene

Lj1g3v5061020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G8A0L2_MEDTR 322 50.7 60.0 (tr|G8A0L2) Maturase K OS=Medicago truncatula GN=MTR_103s0096 PE=4 SV=1
TAIR_pep AT2G46870.1 226 44.9 51.4 | Symbols: NGA1 | AP2/B3-like transcriptional factor family protein | chr2:19261313-19262245 FORWARD LENGTH=310
Medicago Medtr8g023990.1 328 50.4 59.5 | B3 DNA-binding domain protein | HC | chr8:8776349-8774219 | 20130731
Soybean Glyma19g45090.1 320 49.5 56.5  
LJGI gnl|LJGI|CB828503 844 100.0 100.0 similar to UniRef100_A7QJ19 Cluster: Chromosome chr2 scaffold_105, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_105, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v5061020.1 length: 429 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.2e-28 103-207
HMMSmart SM01019 B3 3.7e-23 103-208
ProfileScan PS50863 B3 14.269 103-208
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 1.1e-39 92-206
superfamily SSF101936 DNA-binding 1.9e-27 97-214
no_ID  
HMMPanther PTHR31140 FAMILY 4.4e-74 60-393
Seg seg seg NA 15-32
235-246
250-268
335-345
346-364
Wolf-PSORT
Lj1g3v5061020.1	nucl 12, chlo 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v5061020.1