Miyakogusa Predicted Gene

Lj1g3v4918610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NBU9_SOYBN 893 75.7 85.5 (tr|I1NBU9) Pectinesterase OS=Glycine max PE=3 SV=2
TAIR_pep AT3G05610.1 563 47.4 65.0 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:1625876-1627976 REVERSE LENGTH=669
Medicago Medtr7g112590.1 869 72.9 82.6 | pectinesterase/pectinesterase inhibitor | HC | chr7:46314219-46316459 | 20130731
Soybean Glyma19g41970.1 891 75.8 85.5  
LJGI gnl|LJGI|TC74206 533 98.9 98.9 similar to UniRef100_Q9SC90 Cluster: Pectin methyl-esterase PER precursor; n=2; Medicago truncatula|Rep: Pectin methyl-esterase PER precursor - Medicago truncatula (Barrel medic), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4918610.1 length: 561 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 1.9e-128 238-537
IPR006501 Pectinesterase inhibitor
Molecular Function GO:0004857 enzyme inhibitor activity    
Molecular Function GO:0030599 pectinesterase activity    
Gene3D G3DSA:1.20.140.40 no description 4.2e-33 32-187
HMMPfam PF04043 PMEI 1e-30 30-182
HMMSmart SM00856 Plant 1.7e-33 30-182
HMMTigr TIGR01614 PME_inhib: 3.6e-23 28-186
superfamily SSF101148 Plant 8.1e-29 32-189
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 1.3e-96 231-552
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 1.2e-107 236-551
IPR018040 Pectinesterase, active site
PatternScan PS00503 PECTINESTERASE_2 NA 382-391
PatternScan PS00800 PECTINESTERASE_1 NA 263-282
no_ID  
HMMPanther PTHR31707 FAMILY 1.4e-219 1-554
HMMPanther PTHR31707:SF0 SUBFAMILY 1.4e-219 1-554
Seg seg seg NA 20-36
218-229
Wolf-PSORT
Lj1g3v4918610.1	cyto 9, nucl 2, cysk 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4918610.1