Miyakogusa Predicted Gene

Lj1g3v4898010.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NB53_SOYBN 520 85.9 94.0 (tr|I1NB53) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G47790.1 398 69.7 80.5 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:19571102-19572946 REVERSE LENGTH=392
Medicago Medtr8g058590.1 511 85.6 93.9 | transducin/WD40 repeat protein | HC | chr8:20206221-20201505 | 20130731
Soybean Glyma19g39790.1 520 85.9 94.0  
LJGI gnl|LJGI|GO023748 1332 99.7 99.7 similar to UniRef100_A7Q0A9 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4898010.2 length: 284 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.015 72-108
164-194
HMMSmart SM00320 WD40 0.0049 67-108
111-151
154-195
ProfileScan PS50082 WD_REPEATS_2 11.812 74-117
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 5.7e-27 36-252
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 17.034 74-204
superfamily SSF50978 WD40 6.5e-27 23-247
no_ID  
HMMPanther PTHR22850 WD40 1.6e-70 51-212
HMMPanther PTHR22850:SF61 OS12G0294100 1.6e-70 51-212
Wolf-PSORT
Lj1g3v4898010.2	nucl 7, cyto 3, chlo 2, vacu 1, cysk 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4898010.2