Miyakogusa Predicted Gene

Lj1g3v4862820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JQR6_SOYBN 1374 91.0 95.6 (tr|I1JQR6) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G02060.2 1254 82.9 91.6 | Symbols: PRL | Minichromosome maintenance (MCM2/3/5) family protein | chr4:901484-905297 FORWARD LENGTH=716
Medicago Medtr7g109480.1 1358 89.7 95.1 | DNA replication licensing factor Mcm7, putative | HC | chr7:44778065-44772013 | 20130731
Soybean Glyma03g37770.1 1374 91.0 95.6  
LJGI gnl|LJGI|TC69148 1174 99.8 99.8 similar to UniRef100_A7Q0M6 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4862820.1 length: 720 aa.
IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
FPrintScan PR01657 MCMFAMILY 1.1e-32 369-384
429-443
457-470
481-493
508-516
HMMPfam PF00493 MCM 8.3e-133 316-638
HMMSmart SM00350 minichromosome 2.2e-302 141-640
ProfileScan PS50051 MCM_2 95.498 328-534
IPR008050 DNA replication licensing factor Mcm7
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003678 DNA helicase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006270 DNA replication initiation    
Cellular Component GO:0042555 MCM complex    
FPrintScan PR01663 MCMPROTEIN7 6.8e-21 122-134
160-171
178-189
195-207
287-297
HMMPanther PTHR11630:SF26 DNA 0 7-718
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 4.5e-26 226-299
superfamily SSF50249 Nucleic 2.8e-67 13-297
IPR018525 Mini-chromosome maintenance, conserved site
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
PatternScan PS00847 MCM_1 NA 437-445
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.2e-44 332-663
no_ID  
Gene3D G3DSA:3.30.1640.10 no description 0.00032 15-89
Gene3D G3DSA:3.40.50.300 no description 4.5e-40 338-517
HMMPanther PTHR11630 DNA 0 7-718
Wolf-PSORT
Lj1g3v4862820.1	plas 5, cyto 4, chlo 2, cyto_pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4862820.1