Miyakogusa Predicted Gene

Lj1g3v4830130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KGH2_SOYBN 254 42.7 50.3 (tr|K7KGH2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G09530.2 93.2 43.8 56.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Medicago Medtr7g110810.1 206 41.9 47.9 | helix loop helix DNA-binding domain protein | HC | chr7:45421992-45424245 | 20130731
Soybean Glyma19g40980.1 224 40.6 47.7  
LJGI gnl|LJGI|GO026179 222 100.0 100.0 homologue to UniRef100_Q4TAT9 Cluster: Chromosome undetermined SCAF7258 whole genome shotgun sequence; n=1; Tetraodon, partial (1%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4830130.1 length: 470 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 2.6e-17 314-368
HMMPfam PF00010 HLH 1.5e-12 315-359
HMMSmart SM00353 helix 6.3e-17 316-365
ProfileScan PS50888 BHLH 17.631 310-359
superfamily SSF47459 HLH, 2.9e-19 308-392
IPR024097 Basic helix-loop-helix leucine zipper transcription factor
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPanther PTHR10014 BASIC 3.4e-32 286-386
IPR024102 Basic helix-loop-helix leucine zipper transcription factor, plant
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPanther PTHR10014:SF30 BASIC 3.4e-32 286-386
no_ID  
Seg seg seg NA 58-72
274-287
320-331
372-386
Wolf-PSORT
Lj1g3v4830130.1	nucl 13.5, cyto_nucl 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4830130.1