Miyakogusa Predicted Gene

Lj1g3v4808860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JR04_SOYBN 1215 82.1 89.8 (tr|I1JR04) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT4G11160.1 870 65.8 78.7 | Symbols: | Translation initiation factor 2, small GTP-binding protein | chr4:6803846-6806726 FORWARD LENGTH=743
Medicago Medtr5g032140.2 1175 82.3 90.4 | translation initiation factor IF-2 | HC | chr5:13807540-13799905 | 20130731
Soybean Glyma19g41190.1 1214 82.5 89.3  
LJGI gnl|LJGI|TC65730 1320 100.0 100.0 weakly similar to UniRef100_A7PS12 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (70%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4808860.1 length: 719 aa.
IPR000178 Translation initiation factor aIF-2, bacterial-like
method AccNumber shortName E-value location
Molecular Function GO:0003743 translation initiation factor activity    
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006413 translational initiation    
HMMTigr TIGR00487 IF-2: 1.9e-173 128-704
IPR000795 Elongation factor, GTP-binding domain
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
HMMPfam PF00009 GTP_EFTU 2.2e-38 202-361
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 8.3e-29 201-354
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 2.1e-20 602-706
371-455
IPR015760 Translation initiation factor IF- 2
HMMPanther PTHR23115:SF41 TRANSLATION 4.6e-132 184-685
IPR023115 Translation initiation factor IF- 2, domain 3
Gene3D G3DSA:3.40.50.10050 no description 1.6e-16 501-579
HMMPfam PF11987 IF-2 7.3e-25 498-590
superfamily SSF52156 Initiation 2.6e-23 499-608
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.5e-54 195-390
no_ID  
Gene3D G3DSA:2.40.30.10 no description 3.8e-30 371-462
603-705
Gene3D G3DSA:3.40.50.300 no description 5.6e-44 199-359
HMMPanther PTHR23115 TRANSLATION 4.6e-132 184-685
Seg seg seg NA 259-270
Wolf-PSORT
Lj1g3v4808860.1	chlo 9, mito 2, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4808860.1