Miyakogusa Predicted Gene

Lj1g3v4753360.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IP72_MEDTR 706 77.7 86.2 (tr|G7IP72) Exosome complex exonuclease RRP45 OS=Medicago truncatula GN=MTR_2g019210 PE=4 SV=1
TAIR_pep AT3G60500.3 476 56.5 69.6 | Symbols: CER7 | 3'-5'-exoribonuclease family protein | chr3:22354245-22356440 FORWARD LENGTH=438
Medicago Medtr2g019210.1 706 77.7 86.2 | exosome complex exonuclease RRP41 | HC | chr2:6209449-6213016 | 20130731
Soybean Glyma11g01740.1 607 71.4 80.9  
LJGI gnl|LJGI|TC63574 2585 99.0 99.0 similar to UniRef100_A7Q7D8 Cluster: Chromosome chr18 scaffold_59, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_59, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4753360.1 length: 448 aa.
IPR001247 Exoribonuclease, phosphorolytic domain 1
method AccNumber shortName E-value location
HMMPfam PF01138 RNase_PH 8.2e-21 36-168
IPR015847 Exoribonuclease, phosphorolytic domain 2
HMMPfam PF03725 RNase_PH_C 2.4e-13 197-263
superfamily SSF55666 Ribonuclease 1.3e-08 191-279
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 2.4e-33 27-175
IPR027408 PNPase/RNase PH domain
Gene3D G3DSA:3.30.230.70 no description 1.2e-16 17-279
no_ID  
HMMPanther PTHR11097 EXOSOME 7.2e-147 1-285
HMMPanther PTHR11097:SF8 EXOSOME 7.2e-147 1-285
Seg seg seg NA 144-163
Wolf-PSORT
Lj1g3v4753360.1	chlo 7, nucl 3, plas 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4753360.1