Miyakogusa Predicted Gene

Lj1g3v4752550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JQ95_SOYBN 622 77.6 88.2 (tr|I1JQ95) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G52450.1 483 56.6 75.3 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19442250 REVERSE LENGTH=435
Medicago Medtr7g106340.1 613 74.8 87.2 | E3 ubiquitin-protein ligase PUB23-like protein | HC | chr7:43262343-43264210 | 20130731
Soybean Glyma03g36100.1 622 77.6 88.2  
LJGI gnl|LJGI|TC71228 2524 100.0 100.0 similar to UniRef100_A7QHS6 Cluster: Chromosome chr8 scaffold_99, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_99, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4752550.1 length: 423 aa.
IPR003613 U box domain
method AccNumber shortName E-value location
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 1.4e-18 6-84
HMMSmart SM00504 Modified 6.4e-29 9-80
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.4e-11 75-398
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.3e-28 4-74
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1.1e-08 100-398
no_ID  
HMMPanther PTHR24420 FAMILY 1.3e-44 1-356
HMMPanther PTHR24420:SF168SUBFAMILY NOT 1.3e-44 1-356
Seg seg seg NA 413-423
superfamily SSF57850 RING/U-box 2e-23 1-93
Wolf-PSORT
Lj1g3v4752550.1	cyto 6, chlo 5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4752550.1