Miyakogusa Predicted Gene

Lj1g3v4579390.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L8U0_SOYBN 428 80.0 84.9 (tr|I1L8U0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G09740.1 369 68.0 78.2 | Symbols: SYP71, ATSYP71 | syntaxin of plants 71 | chr3:2989615-2991354 FORWARD LENGTH=266
Medicago Medtr1g066460.1 417 77.0 84.2 | syntaxin of plants protein | HC | chr1:28512776-28508155 | 20130731
Soybean Glyma10g05870.2 428 80.0 84.9  
LJGI gnl|LJGI|DC596145 997 99.8 99.8 similar to UniRef100_A7PT16 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4579390.1 length: 265 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF05739 SNARE 6.1e-14 175-233
HMMSmart SM00397 Helical 1.6e-05 165-232
ProfileScan PS50192 T_SNARE 14.390 170-232
no_ID  
Gene3D G3DSA:1.20.5.110 no description 3.8e-19 160-231
HMMPanther PTHR12380 SYNTAXIN 1.1e-148 1-262
HMMPanther PTHR12380:SF21 HYPOTHETICAL 1.1e-148 1-262
Seg seg seg NA 16-27
244-255
Wolf-PSORT
Lj1g3v4579390.1	nucl 9, mito 1, extr 1, vacu 1, golg 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4579390.1