Miyakogusa Predicted Gene

Lj1g3v4515690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JP58_SOYBN 1062 71.1 82.9 (tr|I1JP58) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G28600.1 711 53.3 69.7 | Symbols: NPGR2 | no pollen germination related 2 | chr4:14130046-14132599 FORWARD LENGTH=739
Medicago Medtr7g097230.1 1115 75.3 84.7 | TPR 7B-like protein | HC | chr7:39119769-39126150 | 20130731
Soybean Glyma03g32240.1 1062 71.1 82.9  
LJGI gnl|LJGI|TC81130 745 100.0 100.0 weakly similar to UniRef100_A7NXF5 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4515690.1 length: 728 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3e-28 335-417
441-720
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 15.593 585-722
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.0005 623-652
689-720
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.056 151-184
458-491
493-526
585-618
619-652
689-722
ProfileScan PS50005 TPR 9.588 458-491
619-652
689-722
no_ID  
HMMPanther PTHR23083 TETRATRICOPEPTIDE 5.3e-194 176-728
HMMPanther PTHR23083:SF163SUBFAMILY NOT 5.3e-194 176-728
Seg seg seg NA 283-292
356-364
superfamily SSF48452 TPR-like 0.00016 526-728
322-556
59-180
Wolf-PSORT
Lj1g3v4515690.1	nucl 5.5, chlo 4, nucl_plas 3.5, cyto 2, mito 1, cysk 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4515690.1