Miyakogusa Predicted Gene

Lj1g3v4107090.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL B9IHQ0_POPTR 319 69.8 76.4 (tr|B9IHQ0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_734755 PE=4 SV=1

TAIR_pep AT3G56760.1 298 91.0 94.8 | Symbols: | Protein kinase superfamily protein | chr3:21020661-21023756 REVERSE LENGTH=577

Medicago Medtr7g089480.1 316 69.2 74.3 | calmodulin-domain kinase CDPK protein | HC | chr7:35036401-35042624 | 20130731

Soybean Glyma02g21350.1 307 72.0 75.6

LJGI gnl|LJGI|TC61580 753 100.0 100.0 homologue to UniRef100_Q2HT01 Cluster: Protein kinase; Calcium-binding EF-hand; n=1; Medicago truncatula|Rep: Protein kinase; Calcium-binding EF-hand - Medicago truncatula (Barrel medic), partial (16%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v4107090.1 length: 225 aa.

IPR000719 Protein kinase, catalytic domain

method AccNumber shortName E-value location

Molecular Function GO:0004672 protein kinase activity

Molecular Function GO:0005524 ATP binding

Biological Process GO:0006468 protein phosphorylation

HMMPfam PF00069 Pkinase 1.2e-15 129-222

ProfileScan PS50011 PROTEIN_KINASE_DOM 18.393 129-225

IPR011009 Protein kinase-like domain

Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups

superfamily SSF56112 Protein 1.9e-23 104-225

IPR017441 Protein kinase, ATP binding site

Molecular Function GO:0005524 ATP binding

PatternScan PS00107 PROTEIN_KINASE_ATP NA 135-161

no_ID

Gene3D G3DSA:3.30.200.20 no description 2.8e-29 60-224

HMMPanther PTHR24349 SERINE/THREONINE-PROTEIN 5e-55 69-225

HMMPanther PTHR24349:SF23 CALCIUM/CALMODULIN-DEPENDENT 5e-55 69-225

Seg seg seg NA 18-29
39-61

Wolf-PSORT

Lj1g3v4107090.1 cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v4107090.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	B9IHQ0_POPTR	319	69.8	76.4	(tr\|B9IHQ0) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_734755 PE=4 SV=1
TAIR_pep	AT3G56760.1	298	91.0	94.8	\| Symbols: \| Protein kinase superfamily protein \| chr3:21020661-21023756 REVERSE LENGTH=577
Medicago	Medtr7g089480.1	316	69.2	74.3	\| calmodulin-domain kinase CDPK protein \| HC \| chr7:35036401-35042624 \| 20130731
Soybean	Glyma02g21350.1	307	72.0	75.6
LJGI	gnl\|LJGI\|TC61580	753	100.0	100.0	homologue to UniRef100_Q2HT01 Cluster: Protein kinase; Calcium-binding EF-hand; n=1; Medicago truncatula\|Rep: Protein kinase; Calcium-binding EF-hand - Medicago truncatula (Barrel medic), partial (16%)

IPR000719	Protein kinase, catalytic domain
Lj1g3v4107090.1				length: 225 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0004672	protein kinase activity
Molecular Function	GO:0005524	ATP binding
Biological Process	GO:0006468	protein phosphorylation
HMMPfam	PF00069	Pkinase	1.2e-15	129-222
ProfileScan	PS50011	PROTEIN_KINASE_DOM	18.393	129-225
IPR011009	Protein kinase-like domain
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups
superfamily	SSF56112	Protein	1.9e-23	104-225
IPR017441	Protein kinase, ATP binding site
Molecular Function	GO:0005524	ATP binding
PatternScan	PS00107	PROTEIN_KINASE_ATP	NA	135-161
no_ID
Gene3D	G3DSA:3.30.200.20	no description	2.8e-29	60-224
HMMPanther	PTHR24349	SERINE/THREONINE-PROTEIN	5e-55	69-225
HMMPanther	PTHR24349:SF23	CALCIUM/CALMODULIN-DEPENDENT	5e-55	69-225
Seg	seg	seg	NA	18-29 39-61