| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JMZ6_SOYBN | 2254 | 80.3 | 86.6 | (tr|I1JMZ6) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT1G65440.2 | 1749 | 69.5 | 81.6 | | Symbols: GTB1 | global transcription factor group B1 | chr1:24306908-24314327 REVERSE LENGTH=1642 |
| Medicago | Medtr7g088700.1 | 2172 | 78.5 | 84.3 | | global transcription factor | HC | chr7:34591539-34580098 | 20130731 |
| Soybean | Glyma19g30560.1 | 2254 | 80.9 | 87.6 | |
| LJGI | gnl|LJGI|TC81948 | 2305 | 99.7 | 99.7 | similar to UniRef100_Q2HUT6 Cluster: SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H- like fold; Nucleic acid-binding, OB-fold, subgroup; n=1; Medicago truncatula|Rep: SH2 motif; Alcohol dehydrogenase, zinc-containing; Resolvase, RNase H- like fold; Nucleic acid-binding, OB-fold, subgroup - Medicago truncatula (Barrel medic), partial (20%) |
| Lj1g3v4081780.1 | length: 1363 aa. | |||
| IPR003029 | Ribosomal protein S1, RNA-binding domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003723 | RNA binding | ||
| ProfileScan | PS50126 | S1 | 10.189 | 850-921 |
| IPR006641 | YqgF/RNase H-like domain | |||
| Biological Process | GO:0006139 | nucleobase-containing compound metabolic process | ||
| Molecular Function | GO:0016788 | hydrolase activity, acting on ester bonds | ||
| Gene3D | G3DSA:3.30.420.140 | no description | 2.3e-08 | 480-611 |
| HMMSmart | SM00732 | Likely | 1e-18 | 467-585 |
| IPR012340 | Nucleic acid-binding, OB-fold | |||
| Gene3D | G3DSA:2.40.50.140 | no description | 8.6e-07 | 842-924 |
| superfamily | SSF50249 | Nucleic | 6.8e-09 | 819-927 |
| IPR017072 | Transcription elongation factor Spt6 | |||
| Biological Process | GO:0006357 | regulation of transcription from RNA polymerase II promoter | ||
| Biological Process | GO:0032784 | regulation of DNA-dependent transcription, elongation | ||
| HMMPIR | PIRSF036947 | Transcription | 0 | 1-1271 |
| HMMPanther | PTHR10145 | TRANSCRIPTION | 0 | 1-1362 |
| IPR022967 | RNA-binding domain, S1 | |||
| HMMSmart | SM00316 | Ribosomal | 1.4e-09 | 848-921 |
| IPR023097 | Tex RuvX-like domain | |||
| Gene3D | G3DSA:1.10.150.310 | no description | 4.6e-24 | 676-824 |
| IPR023323 | Tex-like domain | |||
| Gene3D | G3DSA:1.10.3500.10 | no description | 6.8e-31 | 612-664 |
| no_ID | ||||
| HMMPanther | PTHR10145:SF6 | TRANSCRIPTION | 0 | 1-1362 |
| Seg | seg | seg | NA | 1179-1202 1235-1257 1304-1337 |
| superfamily | SSF55550 | SH2 | 6.3e-05 | 967-1072 1107-1153 |
Lj1g3v4081780.1 nucl 11, chlo 1, cyto 1, vacu 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v4081780.1 | Not targeted | -31.402 | 0 | -3.008 | 33.54% | -28.394 |