Miyakogusa Predicted Gene

Lj1g3v4079400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MY22_SOYBN 461 83.8 89.8 (tr|K7MY22) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G68070.1 260 46.1 63.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:25515412-25516767 REVERSE LENGTH=343
Medicago Medtr7g088500.1 432 80.9 88.0 | E3 ubiquitin protein ligase RIE1-like protein | HC | chr7:34479004-34482328 | 20130731
Soybean Glyma03g27500.1 454 71.3 77.5  
LJGI gnl|LJGI|TC79461 799 99.0 99.0 weakly similar to UniRef100_A7PXY8 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4079400.1 length: 304 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.4e-13 252-294
HMMSmart SM00184 Ring 4.6e-05 253-293
ProfileScan PS50089 ZF_RING_2 12.047 253-294
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.3e-15 249-297
no_ID  
HMMPanther PTHR11203 CLEAVAGE 1.4e-46 40-163
HMMPanther PTHR11203:SF8 INTEGRATOR 1.4e-46 40-163
superfamily SSF57850 RING/U-box 4.7e-17 246-300
Wolf-PSORT
Lj1g3v4079400.1	cyto 10, chlo 1, nucl 1, E.R. 1, cysk 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4079400.1