Miyakogusa Predicted Gene

Lj1g3v3858560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MXH5_SOYBN 780 97.9 99.2 (tr|K7MXH5) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G27000.1 757 93.7 97.9 | Symbols: ARP2, ATARP2, WRM | actin related protein 2 | chr3:9952787-9955784 REVERSE LENGTH=389
Medicago Medtr7g027185.1 779 97.6 99.2 | actin-related protein ARP4 | HC | chr7:9211642-9202153 | 20130731
Soybean Glyma16g05780.1 776 97.6 98.7  
LJGI gnl|LJGI|TC58542 2264 99.9 99.9 homologue to UniRef100_A7P9Y2 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3858560.1 length: 382 aa.
IPR004000 Actin-related protein
method AccNumber shortName E-value location
FPrintScan PR00190 ACTIN 1.6e-28 25-34
62-84
116-129
141-160
237-253
HMMPanther PTHR11937 ACTIN 5.4e-230 1-382
HMMPfam PF00022 Actin 1.7e-114 2-381
HMMSmart SM00268 Actin 3.7e-190 4-380
IPR027306 Actin-related protein 2 (Arp2)
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005856 cytoskeleton    
Cellular Component GO:0005885 Arp2/3 protein complex    
Biological Process GO:0030833 regulation of actin filament polymerization    
Biological Process GO:0034314 Arp2/3 complex-mediated actin nucleation    
HMMPanther PTHR11937:SF37 ACTIN-RELATED 5.4e-230 1-382
no_ID  
Gene3D G3DSA:3.30.420.40 no description 3.8e-17 2-186
258-380
Gene3D G3DSA:3.90.640.10 no description 9.7e-32 187-257
superfamily SSF53067 Actin-like 2e-50 148-379
2-154
Wolf-PSORT
Lj1g3v3858560.1	cyto 10, chlo 1, nucl 1, cysk 1, cysk_nucl 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3858560.1