Miyakogusa Predicted Gene
- Lj1g3v3705150.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|BW600331 |
186 |
93.9 |
93.9 |
similar to UniRef100_Q4RBB3 Cluster: Chromosome undetermined SCAF21804, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome undetermined SCAF21804, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer), partial (31%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3705150.1 |
length: 37 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| ProfileScan |
PS51257 |
PROKAR_LIPOPROTEIN |
6.000 |
1-21 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
8 |
29 |
- Wolf-PSORT
Lj1g3v3705150.1 chlo 5, extr 4, vacu 2, cyto 1, mito 1, E.R. 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3705150.1 |
|