Miyakogusa Predicted Gene

Lj1g3v3580650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SIQ8_LOTJA 344 82.4 83.8 (tr|I3SIQ8) 40S ribosomal protein S8 OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G59240.1 319 77.6 81.5 | Symbols: | Ribosomal protein S8e family protein | chr5:23902626-23903670 REVERSE LENGTH=210
Medicago Medtr7g053450.1 335 80.0 82.9 | 40S ribosomal S8-like protein | HC | chr7:18838026-18834797 | 20130731
Soybean Glyma08g46070.1 337 80.5 83.4  
LJGI gnl|LJGI|TC62427 1300 99.8 99.8 similar to UniRef100_Q3HRZ6 Cluster: Ribosomal protein S8; n=1; Solanum tuberosum|Rep: Ribosomal protein S8 - Solanum tuberosum (Potato), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3580650.1 length: 218 aa.
IPR001047 Ribosomal protein S8e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR10394 40S 9e-155 2-214
HMMTigr TIGR00307 S8e: 2.3e-45 1-198
IPR018283 Ribosomal protein S8e, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS01193 RIBOSOMAL_S8E NA 11-30
IPR022309 Ribosomal protein S8e/ribosomal biogenesis NSA2
HMMPfam PF01201 Ribosomal_S8e 6.2e-51 1-196
no_ID  
HMMPanther PTHR10394:SF1 40S 9e-155 2-214
Seg seg seg NA 17-26
125-135
136-143
206-218
Wolf-PSORT
Lj1g3v3580650.1	nucl 7, chlo 5, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3580650.1