Miyakogusa Predicted Gene
- Lj1g3v3441330.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|DC593222 |
589 |
97.8 |
97.8 |
homologue to UniRef100_A8CG43 Cluster: NADH-ubiquinone oxidoreductase chain 4; n=1; Culicoides arakawae|Rep: NADH-ubiquinone oxidoreductase chain 4 - Culicoides arakawae, partial (4%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3441330.1 |
length: 105 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
25-43 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
78 |
100 |
- Wolf-PSORT
Lj1g3v3441330.1 chlo 5, mito 4, extr 2, cyto_mito 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3441330.1 |
Not targeted |
-66.636 |
-34.352 |
-21.730 |
94.15% |
-10.554
|