Miyakogusa Predicted Gene

Lj1g3v3438900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TNS0_SOYBN 349 75.4 79.7 (tr|C6TNS0) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT5G05830.1 198 59.9 71.0 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr5:1755910-1756825 FORWARD LENGTH=204
Medicago Medtr7g065920.1 327 73.0 77.6 | RING/FYVE/PHD zinc finger protein | HC | chr7:23950286-23946340 | 20130731
Soybean Glyma07g17130.1 349 75.4 79.7  
LJGI gnl|LJGI|FS316307 103 89.1 89.1 similar to UniRef100_A7PIE0 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3438900.1 length: 235 aa.
IPR011016 Zinc finger, RING-CH-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF12906 RINGv 6.7e-11 111-162
HMMSmart SM00744 The 3.4e-16 110-163
ProfileScan PS51292 ZF_RING_CH 18.792 103-169
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 9.3e-15 108-164
no_ID  
HMMPanther PTHR23012 MEMBRANE 8e-31 73-186
HMMPanther PTHR23012:SF3 GB 8e-31 73-186
Seg seg seg NA 21-33
186-199
superfamily SSF57850 RING/U-box 1.2e-10 103-170
Putative transmembrane regions
  From To
TM segments
SOSUI		 209 231
Wolf-PSORT
Lj1g3v3438900.1	chlo 3, nucl 3, cyto 3, E.R. 3, cyto_nucl 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3438900.1