Miyakogusa Predicted Gene

Lj1g3v3406620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KHK0_SOYBN 659 70.9 78.2 (tr|K7KHK0) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G34440.1 524 58.2 70.0 | Symbols: | Protein kinase superfamily protein | chr4:16466008-16468748 FORWARD LENGTH=670
Medicago Medtr3g116450.1 638 67.0 74.1 | receptor-like kinase | HC | chr3:54471714-54475070 | 20130731
Soybean Glyma04g01480.1 603 69.6 77.3  
LJGI gnl|LJGI|FS349020 1055 100.0 100.0 similar to UniRef100_A7P926 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3406620.1 length: 634 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
ProfileScan PS50011 PROTEIN_KINASE_DOM 36.061 272-551
IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF07714 Pkinase_Tyr 1.3e-44 275-543
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 2.2e-32 272-550
IPR008271 Serine/threonine-protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00108 PROTEIN_KINASE_ST NA 392-404
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 9.5e-77 244-545
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 2.6e-07 257-285
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 278-300
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 9.6e-22 272-545
no_ID  
Gene3D G3DSA:1.10.510.10 no description 3.1e-41 352-545
Gene3D G3DSA:3.30.200.20 no description 1.3e-23 286-349
HMMPanther PTHR24420 FAMILY 1.1e-260 1-584
HMMPanther PTHR24420:SF66 SUBFAMILY 1.1e-260 1-584
Seg seg seg NA 2-121
152-163
207-224
228-237
238-249
522-539
Putative transmembrane regions
  From To
TM segments
SOSUI		 141 163
Wolf-PSORT
Lj1g3v3406620.1	nucl 5.5, chlo 4, cysk_nucl 3.5, vacu 2, mito 1, plas 1, E.R._vacu 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3406620.1