Miyakogusa Predicted Gene

Lj1g3v3404350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K789_SOYBN 414 76.6 81.8 (tr|I1K789) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G76460.1 310 61.5 71.4 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:28686932-28688506 REVERSE LENGTH=285
Medicago Medtr3g116130.1 383 76.0 81.6 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr3:54300708-54296502 | 20130731
Soybean Glyma06g01670.1 414 76.6 81.8  
LJGI gnl|LJGI|TC73162 1142 99.8 99.8 similar to UniRef100_A7QPG9 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3404350.1 length: 283 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 3.1e-18 32-88
HMMSmart SM00360 RNA 1.2e-23 31-103
ProfileScan PS50102 RRM 16.756 30-107
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.1e-24 11-110
no_ID  
HMMPanther PTHR24011 FAMILY 1.7e-93 22-281
HMMPanther PTHR24011:SF87 SUBFAMILY 1.7e-93 22-281
Seg seg seg NA 8-16
107-121
157-172
superfamily SSF54928 RNA-binding 2.9e-25 4-126
Wolf-PSORT
Lj1g3v3404350.1	nucl 7, cyto 2, mito 2, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3404350.1