Miyakogusa Predicted Gene

Lj1g3v3381300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J7P9_MEDTR 892 75.4 84.5 (tr|G7J7P9) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_3g117150 PE=4 SV=1
TAIR_pep AT4G21065.1 477 40.1 63.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11245976-11247763 FORWARD LENGTH=595
Medicago Medtr3g117150.1 900 75.3 84.5 | organelle transcript processing protein, putative | HC | chr3:54810037-54807667 | 20130731
Soybean Glyma13g42010.1 868 73.2 83.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3381300.1 length: 576 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.56 140-167
243-266
344-368
HMMPfam PF13041 PPR_2 3.1e-11 167-214
268-316
HMMTigr TIGR00756 PPR: 0.00041 169-202
271-305
307-340
ProfileScan PS51375 PPR 7.300 59-92
167-201
136-166
101-135
202-232
269-303
238-268
304-339
340-370
372-406
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00057 369-424
no_ID  
HMMPanther PTHR24015 FAMILY 1.8e-229 1-576
HMMPanther PTHR24015:SF61 PGR3 1.8e-229 1-576
HMMPfam PF14432 DYW_deaminase 3e-17 454-566
Seg seg seg NA 259-272
Wolf-PSORT
Lj1g3v3381300.1	chlo 6, cyto 5, nucl 1, plas 1, vacu 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3381300.1