Miyakogusa Predicted Gene

Lj1g3v3329140.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N5E5_SOYBN 1134 87.2 92.7 (tr|I1N5E5) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT5G13400.1 986 75.2 86.2 | Symbols: | Major facilitator superfamily protein | chr5:4296854-4299079 REVERSE LENGTH=624
Medicago Medtr7g006540.1 1130 86.5 91.2 | peptide transporter | HC | chr7:735152-730912 | 20130731
Soybean Glyma18g53710.1 1118 87.4 92.6  
LJGI gnl|LJGI|TC81368 930 100.0 100.0 similar to UniRef100_A7QT94 Cluster: Chromosome chr1 scaffold_166, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_166, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3329140.1 length: 634 aa.
IPR000109 Proton-dependent oligopeptide transporter family
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR11654 OLIGOPEPTIDE 1.3e-251 52-614
HMMPfam PF00854 PTR2 3.6e-69 136-545
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 1.6e-24 1-621
IPR018456 PTR2 family proton/oligopeptide symporter, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006857 oligopeptide transport    
Cellular Component GO:0016020 membrane    
PatternScan PS01022 PTR2_1 NA 125-149
no_ID  
HMMPanther PTHR11654:SF37 OLIGOPEPTIDE 1.3e-251 52-614
Seg seg seg NA 539-554
Putative transmembrane regions
  From To
TM segments
SOSUI		 73 95
138 160
186 208
231 253
260 282
294 316
378 400
420 442
456 478
504 526
541 563
584 605
Wolf-PSORT
Lj1g3v3329140.1	plas 12, nucl 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3329140.1