Miyakogusa Predicted Gene

Lj1g3v3244520.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SA13_LOTJA 394 93.1 93.1 (tr|I3SA13) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G01275.2 162 42.9 61.4 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr2:142610-143809 REVERSE LENGTH=259
Medicago Medtr7g082950.1 267 63.7 75.5 | RING/FYVE/PHD zinc finger protein | HC | chr7:31833020-31830329 | 20130731
Soybean Glyma02g10030.1 276 68.4 76.6  
LJGI gnl|LJGI|TC77101 1183 99.5 99.5 similar to UniRef100_A7PR45 Cluster: Chromosome chr14 scaffold_26, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_26, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3244520.2 length: 203 aa.
IPR011016 Zinc finger, RING-CH-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF12906 RINGv 1.6e-12 15-60
HMMSmart SM00744 The 5.3e-20 14-61
ProfileScan PS51292 ZF_RING_CH 20.974 7-67
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.7e-17 13-65
IPR022143 Protein of unknown function DUF3675
HMMPfam PF12428 DUF3675 1.6e-28 66-181
no_ID  
HMMPanther PTHR23012 MEMBRANE 3e-28 5-192
Seg seg seg NA 128-139
superfamily SSF57850 RING/U-box 2.8e-14 7-67
Putative transmembrane regions
  From To
TM segments
SOSUI		 124 146
162 184
Wolf-PSORT
Lj1g3v3244520.2	cyto 4, E.R. 4, cyto_E.R. 4, plas 3, E.R._vacu 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3244520.2