Miyakogusa Predicted Gene

Lj1g3v3217950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K8F2_MEDTR 234 54.4 69.0 (tr|G7K8F2) Cc-nbs-lrr resistance protein OS=Medicago truncatula GN=MTR_5g092190 PE=4 SV=1
TAIR_pep AT4G12010.1 122 44.3 61.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr4:7197325-7201393 REVERSE LENGTH=1219
Medicago Medtr5g092190.1 234 54.4 69.0 | disease resistance protein (TIR-NBS-LRR class) | LC | chr5:40265309-40256638 | 20130731
Soybean Glyma16g33780.1 140 49.0 63.4  
LJGI gnl|LJGI|TC67205 315 83.2 83.2 weakly similar to UniRef100_A7PQ35 Cluster: Chromosome chr18 scaffold_24, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_24, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3217950.1 length: 228 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 1e-36 83-215
HMMSmart SM00255 Toll 4.6e-41 79-219
ProfileScan PS50104 TIR 23.833 78-219
superfamily SSF52200 Toll/Interleukin 6.6e-35 68-222
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 7.1e-10 5-74
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 1.8e-25 78-212
HMMPanther PTHR11017 LEUCINE-RICH 2.4e-41 76-224
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 2.4e-41 76-224
Wolf-PSORT
Lj1g3v3217950.1	nucl 4, cyto 4, cyto_nucl 4, extr 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3217950.1