Miyakogusa Predicted Gene

Lj1g3v3116640.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q1WK58_LOTJA 457 71.0 71.0 (tr|Q1WK58) CYC1 OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G67260.2 104 70.1 88.1 | Symbols: TCP1 | TCP family transcription factor | chr1:25168152-25169307 REVERSE LENGTH=351
Medicago Medtr7g018500.1 194 44.2 50.3 | TCP family transcription factor | HC | chr7:6031315-6033168 | 20130731
Soybean Glyma18g51580.1 179 44.3 53.1  
LJGI gnl|LJGI|NP7225963 1846 99.2 99.2 GB|DQ202475.1|ABB36471.1 CYC1;TCP box gene; LjCYC1
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3116640.2 length: 331 aa.
IPR005333 Transcription factor, TCP
method AccNumber shortName E-value location
HMMPfam PF03634 TCP 1.6e-44 111-252
IPR017887 Transcription factor TCP subgroup
ProfileScan PS51369 TCP 34.783 113-171
IPR017888 CYC/TB1, R domain
ProfileScan PS51370 R 11.607 228-245
no_ID  
Seg seg seg NA 2-31
53-63
104-114
189-211
225-241
Wolf-PSORT
Lj1g3v3116640.2	nucl 13.5, cyto_nucl 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3116640.2