Miyakogusa Predicted Gene

Lj1g3v2624840.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A2Q3P8_MEDTR 1028 79.7 90.4 (tr|A2Q3P8) Flap endonuclease GEN-like protein OS=Medicago truncatula GN=MTR_7g076290 PE=4 SV=1
TAIR_pep AT1G01880.1 638 53.9 70.4 | Symbols: | 5'-3' exonuclease family protein | chr1:306558-308991 REVERSE LENGTH=599
Medicago Medtr7g076290.1 1028 79.7 90.4 | flap endonuclease GEN-like protein | HC | chr7:28709723-28704777 | 20130731
Soybean Glyma18g46230.1 969 77.5 87.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2624840.1 length: 608 aa.
IPR006084 XPG/Rad2 endonuclease
method AccNumber shortName E-value location
Molecular Function GO:0004518 nuclease activity    
Biological Process GO:0006281 DNA repair    
FPrintScan PR00853 XPGRADSUPER 2.3e-20 25-39
70-89
127-144
148-168
203-218
HMMPanther PTHR11081 XP-G/RAD2 1e-175 1-434
IPR006085 XPG N-terminal
Molecular Function GO:0004518 nuclease activity    
Biological Process GO:0006281 DNA repair    
HMMPfam PF00752 XPG_N 4.7e-10 1-90
HMMSmart SM00485 Xeroderma 6.6e-06 1-96
IPR006086 XPG-I domain
Molecular Function GO:0004518 nuclease activity    
HMMPfam PF00867 XPG_I 3.4e-21 129-213
HMMSmart SM00484 Xeroderma 8.5e-15 128-198
IPR020045 5'-3' exonuclease, C-terminal domain
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003824 catalytic activity    
superfamily SSF47807 5' 2.3e-19 198-414
no_ID  
Gene3D G3DSA:1.10.150.20 no description 1.1e-08 198-241
Gene3D G3DSA:3.40.50.1010 no description 5e-41 1-196
HMMPanther PTHR11081:SF18 SUBFAMILY 1e-175 1-434
superfamily SSF88723 PIN 1.8e-48 4-213
Wolf-PSORT
Lj1g3v2624840.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2624840.1