Miyakogusa Predicted Gene

Lj1g3v2624830.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N3K9_SOYBN 568 81.6 87.6 (tr|I1N3K9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G01860.1 421 65.1 79.4 | Symbols: PFC1 | Ribosomal RNA adenine dimethylase family protein | chr1:304439-306275 REVERSE LENGTH=343
Medicago Medtr7g076280.1 536 77.6 84.8 | ribosomal RNA small subunit methyltransferase A | HC | chr7:28703298-28698178 | 20130731
Soybean Glyma09g40000.1 555 79.9 86.5  
LJGI gnl|LJGI|AV411142 769 100.0 100.0 similar to UniRef100_A2Q3P9 Cluster: SAM (And some other nucleotide) binding motif; n=1; Medicago truncatula|Rep: SAM (And some other nucleotide) binding motif - Medicago truncatula (Barrel medic), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2624830.1 length: 348 aa.
IPR001737 Ribosomal RNA adenine methylase transferase
method AccNumber shortName E-value location
Biological Process GO:0000154 rRNA modification    
Molecular Function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity    
Molecular Function GO:0008649 rRNA methyltransferase activity    
HMMPanther PTHR11727 DIMETHYLADENOSINE 5.6e-69 68-348
HMMPfam PF00398 RrnaAD 8.3e-45 77-346
IPR020596 Ribosomal RNA adenine methylase transferase, conserved site
Biological Process GO:0000154 rRNA modification    
Molecular Function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity    
Molecular Function GO:0008649 rRNA methyltransferase activity    
PatternScan PS01131 RRNA_A_DIMETH NA 106-133
IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal
Biological Process GO:0000154 rRNA modification    
Molecular Function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity    
Molecular Function GO:0008649 rRNA methyltransferase activity    
HMMSmart SM00650 Ribosomal 4.5e-51 90-274
IPR023165 rRNA adenine dimethylase-like
Gene3D G3DSA:1.10.8.100 no description 1e-16 280-347
no_ID  
Gene3D G3DSA:3.40.50.150 no description 5.2e-50 61-273
HMMPanther PTHR11727:SF7 SUBFAMILY 5.6e-69 68-348
Seg seg seg NA 282-289
superfamily SSF53335 S-adenosyl-L-methionine-dependent 2.1e-58 67-348
Wolf-PSORT
Lj1g3v2624830.1	chlo 13.5, chlo_mito 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2624830.1