Miyakogusa Predicted Gene

Lj1g3v2377970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L1Y8_SOYBN 594 74.3 79.8 (tr|K7L1Y8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G38330.1 444 55.0 68.8 | Symbols: | MATE efflux family protein | chr2:16064571-16067318 FORWARD LENGTH=521
Medicago Medtr7g070210.1 442 69.9 75.4 | MATE efflux family protein | HC | chr7:25888335-25894559 | 20130731
Soybean Glyma18g43740.1 474 60.5 67.2  
LJGI gnl|LJGI|TC64010 137 100.0 100.0 similar to UniRef100_A7QFF0 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2377970.1 length: 438 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 6.9e-16 83-187
252-394
HMMTigr TIGR00797 matE: 1.4e-90 9-414
no_ID  
HMMPanther PTHR11206 MULTIDRUG 6e-183 1-434
HMMPanther PTHR11206:SF47 MATE 6e-183 1-434
Seg seg seg NA 3-22
92-106
187-205
285-299
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
26 48
100 122
140 162
178 200
208 230
247 269
279 301
315 337
355 377
384 406
411 433
Wolf-PSORT
Lj1g3v2377970.1	vacu 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2377970.1 Not targeted -49.260 -0.005 -0.317 73.08% -48.939