Miyakogusa Predicted Gene
- Lj1g3v2359000.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|FS324075 |
127 |
100.0 |
100.0 |
similar to UniRef100_A8MRZ0 Cluster: Uncharacterized protein At1g02850.2; n=1; Arabidopsis thaliana|Rep: Uncharacterized protein At1g02850.2 - Arabidopsis thaliana (Mouse-ear cress), partial (31%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2359000.1 |
length: 116 aa. |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
0.0008 |
28-54 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
17-31 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
13 |
35 |
| 47 |
69 |
| 93 |
115 |
- Wolf-PSORT
Lj1g3v2359000.1 plas 7.5, cyto_plas 4.5, E.R. 3, mito 1, vacu 1, golg 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2359000.1 |
|