Miyakogusa Predicted Gene

Lj1g3v2325590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N2X4_SOYBN 874 85.7 87.8 (tr|I1N2X4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G01460.1 834 78.6 85.5 | Symbols: | LMBR1-like membrane protein | chr5:186823-190008 FORWARD LENGTH=509
Medicago Medtr7g068440.1 838 82.9 87.2 | LIMR family protein | HC | chr7:25050246-25055627 | 20130731
Soybean Glyma18g43020.1 874 85.7 87.8  
LJGI gnl|LJGI|TC58455 1283 97.4 97.4 homologue to UniRef100_A7PP47 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2325590.1 length: 509 aa.
IPR006876 LMBR1-like membrane protein
method AccNumber shortName E-value location
HMMPfam PF04791 LMBR1 2e-122 12-488
no_ID  
Coil coil coiled-coil NA 256-277
290-311
HMMPanther PTHR31652 FAMILY 3.2e-208 2-509
HMMPanther PTHR31652:SF0 SUBFAMILY 3.2e-208 2-509
Seg seg seg NA 6-22
159-168
380-392
442-454
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
42 64
89 110
126 148
203 225
327 349
389 410
419 441
474 495
Wolf-PSORT
Lj1g3v2325590.1	plas 5, vacu 4, E.R._plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2325590.1