Miyakogusa Predicted Gene

Lj1g3v2141160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J4P1_MEDTR 1493 70.5 77.7 (tr|G7J4P1) Receptor-like protein kinase OS=Medicago truncatula GN=MTR_3g113140 PE=4 SV=1
TAIR_pep AT1G75640.1 1239 58.8 71.2 | Symbols: | Leucine-rich receptor-like protein kinase family protein | chr1:28403600-28407022 REVERSE LENGTH=1140
Medicago Medtr3g113140.1 1491 70.4 77.7 | LRR receptor-like kinase | HC | chr3:52860029-52863936 | 20130731
Soybean Glyma04g02920.1 1457 69.0 78.1  
LJGI gnl|LJGI|FS360095 1566 99.9 99.9 similar to UniRef100_A7NT13 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2141160.1 length: 1140 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 2.1e-31 845-1069
ProfileScan PS50011 PROTEIN_KINASE_DOM 31.086 842-1127
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.069 168-188
344-366
368-390
562-579
634-656
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 1.9e-21 842-1117
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 31 96-120
144-168
214-238
262-285
366-390
414-437
438-462
536-559
560-583
584-608
632-656
680-704
IPR008271 Serine/threonine-protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00108 PROTEIN_KINASE_ST NA 964-976
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 5.1e-65 814-1139
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 5.5e-09 33-72
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 0.00035 751-847
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 7.2e-12 842-1118
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 1.8e-08 586-633
no_ID  
FPrintScan PR00019 LEURICHRPT 1.7e-05 441-454
680-693
Gene3D G3DSA:1.10.510.10 no description 2.9e-35 927-1122
Gene3D G3DSA:3.30.200.20 no description 1.3e-11 848-926
Gene3D G3DSA:3.80.10.10 no description 3.1e-69 32-283
292-477
480-739
HMMPanther PTHR24420 FAMILY 0 173-1139
HMMPanther PTHR24420:SF296SUBFAMILY NOT 0 173-1139
HMMPfam PF13504 LRR_7 6.8 97-111
HMMPfam PF13855 LRR_8 1.4e-07 216-275
416-475
658-717
Seg seg seg NA 2-15
141-152
437-448
676-694
754-763
766-781
1070-1086
superfamily SSF52047 RNI-like 6.6e-55 293-554
superfamily SSF52058 L 7.2e-57 479-745
29-285
Putative transmembrane regions
  From To
TM segments
SOSUI		 3 25
763 785
Wolf-PSORT
Lj1g3v2141160.1	plas 11, nucl 1, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2141160.1