Miyakogusa Predicted Gene

Lj1g3v2036740.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KTT9_SOYBN 1485 89.8 92.7 (tr|K7KTT9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G11490.1 1318 77.7 85.9 | Symbols: | adaptin family protein | chr5:3671964-3676144 FORWARD LENGTH=841
Medicago Medtr3g109922.1 1511 89.7 92.3 | beta-adaptin A-like protein | HC | chr3:50689381-50699624 | 20130731
Soybean Glyma04g08480.1 1485 89.5 92.9  
LJGI gnl|LJGI|TC80422 1689 99.7 99.7 similar to UniRef100_A7P5C4 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2036740.2 length: 838 aa.
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030117 membrane coat    
HMMPfam PF01602 Adaptin_N 2.9e-95 35-550
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.1e-133 18-578
IPR012295 Beta2-adaptin/TBP, C-terminal domain
Gene3D G3DSA:3.30.310.10 no description 9.3e-05 725-832
IPR015151 Beta-adaptin appendage, C-terminal subdomain
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF09066 B2-adapt-app_C 1.7e-24 722-833
HMMSmart SM01020 Beta2-adaptin 5.7e-27 716-833
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 1e-102 17-598
IPR016342 AP-1, 2,4 complex subunit beta
Molecular Function GO:0008565 protein transporter activity    
Biological Process GO:0015031 protein transport    
HMMPIR PIRSF002291 Adaptor 2.2e-260 9-834
IPR026739 AP complex subunit beta
Biological Process GO:0016192 vesicle-mediated transport    
HMMPanther PTHR11134 ADAPTER-RELATED 0 14-789
no_ID  
HMMPanther PTHR11134:SF4 ADAPTER-RELATED 0 14-789
Seg seg seg NA 3-16
205-218
522-532
Wolf-PSORT
Lj1g3v2036740.2	chlo 10, nucl 2, mito 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2036740.2