Miyakogusa Predicted Gene
- Lj1g3v2023010.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5X3A2_PRUPE |
602 |
58.4 |
71.2 |
(tr|M5X3A2) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014934mg PE=4 SV=1 |
| TAIR_pep |
AT4G27300.1 |
494 |
50.5 |
64.5 |
| Symbols: | S-locus lectin protein kinase family protein | chr4:13669308-13672348 REVERSE LENGTH=815 |
| Medicago |
Medtr3g007650.1 |
536 |
51.0 |
65.2 |
| S-locus lectin kinase family protein | LC | chr3:1103372-1108535 | 20130731 |
| Soybean |
Glyma06g40560.1 |
561 |
52.5 |
67.6 |
|
| LJGI |
gnl|LJGI|AV409113 |
609 |
100.0 |
100.0 |
weakly similar to UniRef100_Q39502 Cluster: ORF111; n=1; Cylindrotheca fusiformis|Rep: ORF111 - Cylindrotheca fusiformis (Marine diatom), partial (20%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2023010.1 |
length: 562 aa. |
| IPR000719 |
Protein kinase, catalytic domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| ProfileScan |
PS50011 |
PROTEIN_KINASE_DOM |
38.167 |
250-533 |
| IPR000858 |
S-locus glycoprotein |
| Biological Process |
GO:0048544 |
recognition of pollen |
|
|
| HMMPfam |
PF00954 |
S_locus_glycop |
1.8e-05 |
28-69 |
| IPR001245 |
Serine-threonine/tyrosine-protein kinase catalytic domain |
| Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| HMMPfam |
PF07714 |
Pkinase_Tyr |
1.4e-48 |
252-521 |
| IPR002290 |
Serine/threonine- / dual specificity protein kinase, catalytic domain |
| Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| HMMSmart |
SM00220 |
Serine/Threonine |
1.2e-30 |
250-522 |
| IPR003609 |
Apple-like |
| HMMSmart |
SM00473 |
divergent |
2.1e-08 |
92-164 |
| ProfileScan |
PS50948 |
PAN |
10.015 |
91-165 |
| IPR008271 |
Serine/threonine-protein kinase, active site |
| Molecular Function |
GO:0004674 |
protein serine/threonine kinase activity |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| PatternScan |
PS00108 |
PROTEIN_KINASE_ST |
NA |
371-383 |
| IPR011009 |
Protein kinase-like domain |
| Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
| superfamily |
SSF56112 |
Protein |
1.2e-82 |
236-553 |
| IPR013227 |
PAN-2 domain |
| HMMPfam |
PF08276 |
PAN_2 |
1.7e-13 |
91-151 |
| IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
| Gene3D |
G3DSA:2.60.120.200 |
no description |
4.2e-10 |
166-263 |
| IPR020635 |
Tyrosine-protein kinase, catalytic domain |
| Molecular Function |
GO:0004713 |
protein tyrosine kinase activity |
|
|
| Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
| HMMSmart |
SM00219 |
Tyrosine |
2.4e-39 |
250-522 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.510.10 |
no description |
5.6e-42 |
313-517 |
| Gene3D |
G3DSA:3.30.200.20 |
no description |
3.7e-27 |
264-312 |
| HMMPanther |
PTHR24420 |
FAMILY |
3.1e-224 |
40-556 |
| HMMPanther |
PTHR24420:SF126SUBFAMILY |
NOT |
3.1e-224 |
40-556 |
| Seg |
seg |
seg |
NA |
182-199 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
6 |
28 |
| 125 |
144 |
| 182 |
204 |
- Wolf-PSORT
Lj1g3v2023010.1 chlo 5, plas 4, nucl 1, cyto 1, extr 1, E.R. 1, cysk 1, cyto_nucl 1, cysk_nucl 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2023010.1 |
|