Miyakogusa Predicted Gene

Lj1g3v1932600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K915_SOYBN 533 86.0 91.3 (tr|I1K915) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G25560.1 414 68.6 78.6 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger protein | chr5:8899486-8901391 FORWARD LENGTH=308
Medicago Medtr3g108240.3 519 84.6 89.3 | CHY and CTCHY and RING-type zinc finger protein | HC | chr3:50011412-50017056 | 20130731
Soybean Glyma06g07800.1 533 86.0 91.3  
LJGI gnl|LJGI|TC75207 852 100.0 100.0 similar to UniRef100_Q5JL96 Cluster: Zinc finger protein ZFP-like; n=1; Oryza sativa Japonica Group|Rep: Zinc finger protein ZFP-like - Oryza sativa subsp. japonica (Rice), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1932600.1 length: 288 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 4.6e-09 187-232
HMMSmart SM00184 Ring 7.5e-07 188-230
ProfileScan PS50089 ZF_RING_2 11.604 188-231
IPR004039 Rubredoxin-type fold
Gene3D G3DSA:2.20.28.10 no description 8.1e-12 259-288
IPR008913 Zinc finger, CHY-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF05495 zf-CHY 4e-16 52-135
ProfileScan PS51266 ZF_CHY 25.786 45-121
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.5e-12 186-246
IPR017921 Zinc finger, CTCHY-type
ProfileScan PS51270 ZF_CTCHY 34.102 123-187
no_ID  
Coil coil coiled-coil NA 25-46
HMMPanther PTHR21319 RING 3.2e-129 18-287
superfamily SSF57850 RING/U-box 2.6e-10 181-252
Wolf-PSORT
Lj1g3v1932600.1	cyto 5, nucl 4, extr 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1932600.1