Miyakogusa Predicted Gene

Lj1g3v1914960.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9H9R8_POPTR 883 82.2 89.2 (tr|B9H9R8) 3-ketoacyl-CoA synthase OS=Populus trichocarpa GN=POPTRDRAFT_561843 PE=3 SV=1
TAIR_pep AT2G26640.1 843 78.6 87.5 | Symbols: KCS11 | 3-ketoacyl-CoA synthase 11 | chr2:11330094-11331623 FORWARD LENGTH=509
Medicago Medtr2g054940.1 849 77.7 88.1 | 3-ketoacyl-CoA synthase-like protein | HC | chr2:23501338-23498653 | 20130731
Soybean Glyma05g08190.1 845 77.6 87.8  
LJGI gnl|LJGI|GO035043 1049 99.6 99.6 homologue to UniRef100_A7P5K1 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1914960.1 length: 507 aa.
IPR012392 Very-long-chain 3-ketoacyl-CoA synthase
method AccNumber shortName E-value location
Biological Process GO:0006633 fatty acid biosynthetic process    
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPIR PIRSF036417 Very-long-chain 0 1-507
IPR013601 FAE1/Type III polyketide synthase-like protein
Biological Process GO:0006633 fatty acid biosynthetic process    
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPfam PF08392 FAE1_CUT1_RppA 4.2e-147 90-379
IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal
Biological Process GO:0008610 lipid biosynthetic process    
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups    
HMMPfam PF08541 ACP_syn_III_C 9.7e-10 396-476
IPR016038 Thiolase-like, subgroup
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.47.10 no description 1.8e-54 90-295
306-479
IPR016039 Thiolase-like
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF53901 Thiolase-like 4.1e-36 82-303
283-481
no_ID  
HMMPanther PTHR31561 FAMILY 0 1-507
Seg seg seg NA 82-93
Putative transmembrane regions
  From To
TM segments
SOSUI		 35 57
70 92
Wolf-PSORT
Lj1g3v1914960.1	plas 7, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1914960.1