Miyakogusa Predicted Gene

Lj1g3v1888540.1

Related links:

GeneModel
LORE1 insertion

Predicted Sequence Links:

Translated sequence
Nucleotide sequence

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep --No_Hits--

Medicago --No_Hits--

Soybean --No_Hits--

LJGI gnl|LJGI|TC61444 583 100.0 100.0 weakly similar to UniRef100_A7P5V4 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)

Putative transmembrane regions

From To

TM segments
SOSUI 67 89

Wolf-PSORT

Lj1g3v1888540.1 chlo 11, mito 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v1888540.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	--No_Hits--
Medicago	--No_Hits--
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC61444	583	100.0	100.0	weakly similar to UniRef100_A7P5V4 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)