Miyakogusa Predicted Gene

Lj1g3v1785860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M903_SOYBN 575 56.8 62.8 (tr|I1M903) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G25970.1 336 43.5 51.9 | Symbols: | KH domain-containing protein | chr2:11071844-11075604 REVERSE LENGTH=632
Medicago Medtr3g104270.1 563 58.3 64.2 | RNA-binding KH domain protein | HC | chr3:48031833-48027169 | 20130731
Soybean Glyma17g34850.1 568 55.8 62.2  
LJGI gnl|LJGI|TC77869 2401 100.0 100.0 similar to UniRef100_A7P4I3 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1785860.1 length: 597 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 1.6e-18 94-167
187-261
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 4.6e-17 98-162
191-256
ProfileScan PS50084 KH_TYPE_1 17.443 95-162
188-256
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 2.7e-21 99-168
189-263
HMMPanther PTHR10288 KH 2.7e-51 32-582
HMMPanther PTHR10288:SF53 KH 2.7e-51 32-582
Seg seg seg NA 59-71
278-295
315-330
348-369
486-501
524-541
superfamily SSF54791 Eukaryotic 3.8e-19 82-173
175-262
Wolf-PSORT
Lj1g3v1785860.1	nucl 9, mito 3, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1785860.1