Miyakogusa Predicted Gene
- Lj1g3v1650140.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T644_LOTJA |
412 |
95.8 |
95.8 |
(tr|I3T644) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G07700.1 |
203 |
73.4 |
89.5 |
| Symbols: | Thioredoxin superfamily protein | chr1:2380214-2381127 FORWARD LENGTH=204 |
| Medicago |
Medtr3g101740.1 |
270 |
68.3 |
75.1 |
| thioredoxin | HC | chr3:46836481-46838376 | 20130731 |
| Soybean |
Glyma06g04300.1 |
286 |
69.3 |
77.5 |
|
| LJGI |
gnl|LJGI|TC63624 |
1279 |
100.0 |
100.0 |
similar to UniRef100_A7NTV9 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1650140.1 |
length: 213 aa. |
| IPR005746 |
Thioredoxin |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006662 |
glycerol ether metabolic process |
|
|
| Molecular Function |
GO:0009055 |
electron carrier activity |
|
|
| Molecular Function |
GO:0015035 |
protein disulfide oxidoreductase activity |
|
|
| Biological Process |
GO:0045454 |
cell redox homeostasis |
|
|
| HMMPanther |
PTHR10438 |
THIOREDOXIN-RELATED |
4.9e-64 |
79-209 |
| IPR012336 |
Thioredoxin-like fold |
| Gene3D |
G3DSA:3.40.30.10 |
no description |
1.2e-16 |
93-202 |
| ProfileScan |
PS51352 |
THIOREDOXIN_2 |
9.219 |
67-205 |
| superfamily |
SSF52833 |
Thioredoxin-like |
1.3e-17 |
57-209 |
| IPR013766 |
Thioredoxin domain |
| Biological Process |
GO:0045454 |
cell redox homeostasis |
|
|
| HMMPfam |
PF00085 |
Thioredoxin |
7.6e-12 |
95-201 |
| no_ID |
|
| HMMPanther |
PTHR10438:SF126SUBFAMILY |
NOT |
4.9e-64 |
79-209 |
| Seg |
seg |
seg |
NA |
76-84 |
- Wolf-PSORT
Lj1g3v1650140.1 cyto 9, nucl 1, mito 1, E.R. 1, cysk 1, golg 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1650140.1 |
|