Miyakogusa Predicted Gene

Lj1g3v1092730.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J9Q5_MEDTR 1246 76.8 85.4 (tr|G7J9Q5) SET and MYND domain-containing protein OS=Medicago truncatula GN=MTR_3g093440 PE=4 SV=1
TAIR_pep AT1G33400.1 680 45.5 66.3 | Symbols: TPR9 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:12104891-12109488 REVERSE LENGTH=798
Medicago Medtr3g093440.1 1254 77.5 86.1 | heat shock protein 70 (HSP70)-interacting protein, putative | HC | chr3:42700311-42708495 | 20130731
Soybean Glyma04g40310.1 1181 75.4 82.1  
LJGI gnl|LJGI|DC597985 1122 99.7 99.7 similar to UniRef100_A7Q3C5 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1092730.1 length: 779 aa.
IPR001214 SET domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00856 SET 3.4e-08 226-514
ProfileScan PS50280 SET 11.919 462-518
IPR001440 Tetratricopeptide TPR-1
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 0.028 140-160
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.3e-25 672-705
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 11.248 63-173
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 20 63-96
106-139
140-173
678-711
no_ID  
Gene3D G3DSA:2.170.270.10 no description 2e-10 442-539
HMMPanther PTHR12197 SET 6.8e-162 58-768
HMMPanther PTHR12197:SF71 PUTATIVE 6.8e-162 58-768
HMMPfam PF13414 TPR_11 3.7e-12 62-137
Seg seg seg NA 423-432
superfamily SSF48452 TPR-like 5.4e-23 54-703
superfamily SSF82199 SET 1.6e-19 210-541
Wolf-PSORT
Lj1g3v1092730.1	cyto 8, nucl 4, cyto_pero 4, cyto_E.R. 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1092730.1