Miyakogusa Predicted Gene

Lj1g3v0873010.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL J7ILM4_ARAHY 413 78.1 86.4 (tr|J7ILM4) Natural resistance-associated macrophage protein 1 OS=Arachis hypogaea GN=NRAMP1 PE=2 SV=1
TAIR_pep AT1G15960.1 325 61.4 74.6 | Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527
Medicago Medtr3g088440.1 398 74.7 82.3 | NRAMP metal ion transporter 6 | HC | chr3:40141672-40136599 | 20130731
Soybean Glyma06g12190.1 401 79.2 86.4  
LJGI gnl|LJGI|DC594872 513 91.9 91.9 similar to UniRef100_Q68G88 Cluster: Root-specific metal transporter; n=1; Malus baccata|Rep: Root-specific metal transporter - Malus baccata, partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0873010.1 length: 265 aa.
IPR001046 Natural resistance-associated macrophage like
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00447 NATRESASSCMP 1.7e-38 46-69
156-175
184-201
216-235
HMMPanther PTHR11706 MANGANESE 9.7e-164 1-265
HMMPfam PF01566 Nramp 3.7e-71 2-246
no_ID  
HMMPanther PTHR11706:SF10 METAL 9.7e-164 1-265
Seg seg seg NA 196-216
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 23
44 66
84 106
148 170
183 205
212 234
245 264
Wolf-PSORT
Lj1g3v0873010.1	vacu 10, extr 2, plas 1, E.R. 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0873010.1