Miyakogusa Predicted Gene

Lj1g3v0513130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KKN2_SOYBN 454 60.1 68.5 (tr|K7KKN2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G47500.1 294 49.0 60.1 | Symbols: CDF3 | cycling DOF factor 3 | chr3:17504276-17505964 REVERSE LENGTH=448
Medicago Medtr3g435480.1 401 56.6 64.6 | DOF-type zinc finger DNA-binding family protein | HC | chr3:11626578-11623421 | 20130731
Soybean Glyma06g20950.1 449 60.2 67.3  
LJGI gnl|LJGI|TC69533 1235 98.8 98.8 similar to UniRef100_A7PDL2 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0513130.1 length: 525 aa.
IPR003851 Zinc finger, Dof-type
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
BlastProDom PD007478 DOF33_ARATH_Q8LFV3; 1e-20 184-230
HMMPfam PF02701 zf-Dof 4.4e-36 173-233
PatternScan PS01361 ZF_DOF_1 NA 179-215
ProfileScan PS50884 ZF_DOF_2 28.164 177-231
no_ID  
HMMPanther PTHR31089 FAMILY 3.1e-86 73-525
HMMPanther PTHR31089:SF0 SUBFAMILY 3.1e-86 73-525
Seg seg seg NA 32-45
79-91
152-183
430-442
Wolf-PSORT
Lj1g3v0513130.1	nucl 12, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0513130.1 Not targeted -40.537 -1.871 -1.587 54.60% -37.078