Miyakogusa Predicted Gene

Lj1g3v0426840.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SI98_LOTJA 435 88.5 89.7 (tr|I3SI98) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G62610.1 217 49.3 57.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:25133117-25134600 REVERSE LENGTH=281
Medicago Medtr5g037250.1 214 50.8 60.2 | transcription factor | HC | chr5:16271354-16268287 | 20130731
Soybean Glyma06g20000.1 317 63.5 70.8  
LJGI gnl|LJGI|TC80652 1511 100.0 100.0 similar to UniRef100_Q5U8L7 Cluster: BHLH transcription factor; n=1; Gossypium hirsutum|Rep: BHLH transcription factor - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0426840.1 length: 253 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 3.3e-17 130-199
HMMPfam PF00010 HLH 8.2e-09 134-181
HMMSmart SM00353 helix 5.9e-10 136-186
ProfileScan PS50888 BHLH 15.758 130-180
superfamily SSF47459 HLH, 2.5e-17 128-213
no_ID  
Coil coil coiled-coil NA 177-198
HMMPanther PTHR12565 STEROL 1.8e-48 101-216
HMMPanther PTHR12565:SF7 BASIC 1.8e-48 101-216
Seg seg seg NA 76-89
Wolf-PSORT
Lj1g3v0426840.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0426840.1