Miyakogusa Predicted Gene

Lj0g3v0347039.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SQ21_LOTJA 299 60.9 76.3 (tr|I3SQ21) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G26340.1 126 30.0 45.7 | Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr4:13324130-13325559 FORWARD LENGTH=419
Medicago Medtr1g041245.1 229 37.5 57.2 | cyclin-like F-box protein | HC | chr1:15330666-15327969 | 20130731
Soybean Glyma08g46320.1 239 38.4 59.3  
LJGI gnl|LJGI|TC59854 1405 100.0 100.0 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_111, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0347039.1 length: 388 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 6.2e-05 4-36
superfamily SSF81383 F-box 2.2e-08 3-41
IPR006566 FBD
HMMPfam PF08387 FBD 1.4e-11 313-355
HMMSmart SM00579 domain 4.8e-11 315-386
no_ID  
Gene3D G3DSA:3.80.10.10 no description 6.2e-19 329-330
HMMPanther PTHR32484 FAMILY 4.3e-43 1-387
superfamily SSF52047 RNI-like 1.2e-12 98-295
Putative transmembrane regions
  From To
TM segments
SOSUI		 130 151
Wolf-PSORT
Lj0g3v0347039.1	cyto 8, nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0347039.1