Miyakogusa Predicted Gene

Lj0g3v0333949.1

Related links:

GeneModel
LORE1 insertion

Predicted Sequence Links:

Translated sequence
Nucleotide sequence

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep --No_Hits--

Medicago --No_Hits--

Soybean --No_Hits--

LJGI gnl|LJGI|TC71335 95.6 92.6 92.6 similar to UniRef100_A7PTX8 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)

Putative transmembrane regions

From To

TM segments
SOSUI 2 24

47 69

Wolf-PSORT

Lj0g3v0333949.1 extr 4, E.R. 4, chlo 2, vacu 2, golg 2, E.R._plas 2, cyto_E.R. 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0333949.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	--No_Hits--
Medicago	--No_Hits--
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC71335	95.6	92.6	92.6	similar to UniRef100_A7PTX8 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%)