Miyakogusa Predicted Gene

Lj0g3v0332639.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LW22_SOYBN 798 61.8 73.1 (tr|K7LW22) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G03430.1 705 54.7 69.5 | Symbols: STA1, EMB2770 | pre-mRNA splicing factor-related | chr4:1517411-1520500 REVERSE LENGTH=1029
Medicago Medtr7g068630.1 762 59.5 70.5 | pre-mRNA splicing factor-like protein | HC | chr7:25167319-25162067 | 20130731
Soybean Glyma13g37420.1 793 61.7 73.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0332639.1 length: 724 aa.
IPR003107 RNA-processing protein, HAT helix
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006396 RNA processing    
HMMSmart SM00386 HAT 5.7e+02 103-135
164-196
325-357
393-425
427-458
460-492
503-535
567-599
631-663
665-697
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.3e-16 275-424
623-690
IPR027108 Pre-mRNA-processing factor 6/Prp1
HMMPanther PTHR11246:SF1 PRE-MRNA 6.9e-208 81-717
no_ID  
Coil coil coiled-coil NA 422-443
HMMPanther PTHR11246 PRE-MRNA 6.9e-208 81-717
Seg seg seg NA 47-62
274-286
398-409
superfamily SSF48452 TPR-like 0.0009 404-571
538-700
330-439
85-234
Wolf-PSORT
Lj0g3v0332639.1	cyto 5, chlo 3, nucl 3, mito 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0332639.1