Miyakogusa Predicted Gene

Lj0g3v0319309.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KJI6_SOYBN 796 88.2 93.0 (tr|K7KJI6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G56290.1 645 72.1 83.5 | Symbols: PEX5, ATPEX5 | peroxin 5 | chr5:22786655-22791972 FORWARD LENGTH=728
Medicago Medtr3g009230.1 779 87.1 90.9 | peroxisomal targeting signal 1 receptor | HC | chr3:1861007-1847857 | 20130731
Soybean Glyma06g47820.2 799 88.2 92.7  
LJGI gnl|LJGI|TC80308 1128 99.7 99.7 similar to UniRef100_Q9ZTK6 Cluster: Peroxisomal targeting signal 1 receptor; n=2; Nicotiana tabacum|Rep: Peroxisomal targeting signal 1 receptor - Nicotiana tabacum (Common tobacco), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0319309.1 length: 437 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 6.6e-09 367-398
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 8.8e-35 167-265
284-399
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 36.883 164-399
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.00071 198-231
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 2.5e-06 198-231
298-331
332-365
366-399
ProfileScan PS50005 TPR 12.213 198-231
232-265
298-331
332-365
366-399
IPR024111 Peroxisomal targeting signal 1 receptor family
HMMPanther PTHR10130 PEROXISOMAL 2.3e-171 1-437
IPR024113 Peroxisomal targeting signal 1 receptor
HMMPanther PTHR10130:SF0 PEROXISOMAL 2.3e-171 1-437
no_ID  
HMMPfam PF13414 TPR_11 1.3e-11 300-363
Seg seg seg NA 179-192
superfamily SSF48452 TPR-like 1.8e-98 146-436
Wolf-PSORT
Lj0g3v0319309.1	chlo 7, mito 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0319309.1