| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7KWS6_MEDTR | 675 | 71.0 | 84.7 | (tr|G7KWS6) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g024140 PE=4 SV=1 |
| TAIR_pep | AT5G46680.1 | 437 | 45.0 | 67.5 | | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:18941118-18942524 FORWARD LENGTH=468 |
| Medicago | Medtr7g024140.1 | 675 | 71.0 | 84.7 | | PPR containing plant-like protein, putative | HC | chr7:7909644-7911925 | 20130731 |
| Soybean | Glyma03g14870.1 | 655 | 68.7 | 83.2 | |
| LJGI | --No_Hits-- |
| Lj0g3v0315799.1 | length: 506 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 9.4e-06 | 268-297 |
| HMMPfam | PF12854 | PPR_1 | 5.5e-06 | 157-185 |
| HMMPfam | PF13041 | PPR_2 | 2.5e-07 | 89-135 195-244 335-384 406-450 |
| HMMPfam | PF13812 | PPR_3 | 0.00052 | 304-335 |
| HMMTigr | TIGR00756 | PPR: | 0.00017 | 92-126 127-161 163-186 199-230 234-267 268-299 304-336 339-367 373-403 411-436 |
| ProfileScan | PS51375 | PPR | 8.539 | 90-124 55-89 125-159 160-195 196-230 231-265 266-300 301-335 336-370 371-405 406-440 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 1.3e-11 | 136-398 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 7e-123 | 51-504 |
| HMMPanther | PTHR24015:SF0 | SUBFAMILY | 7e-123 | 51-504 |
| superfamily | SSF48452 | TPR-like | 2.2e-07 | 263-375 |
| superfamily | SSF81901 | HCP-like | 9.7e-06 | 160-431 |
Lj0g3v0315799.1 chlo 14
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0315799.1 |